Index

A

Abbema (class in duo.zeff.abbema) AbbemaCoeffCalculator (class in duo.zeff.abbema_coeff_calculator) AddControlPointsToImage() (duo.zeff.zeff_table.ZeffTableGenerator method) AddDelimitingLinesToImage() (duo.zeff.zeff_table.ZeffTableGenerator method) AddElement() (duo.core.material.Material method) AddExtraMaterial() (duo.zeff.control_point.ControlPointManagerColonEC method) AddExtraMaterial2() (duo.zeff.control_point.ControlPointManagerColonEC method) (duo.zeff.control_point.ControlPointManagerColonECExtra method) (duo.zeff.control_point.ControlPointManagerKidneyStone method) (duo.zeff.control_point.ControlPointManagerKidneyStoneExtra method) (duo.zeff.control_point.ControlPointManagerSpecial1 method) (duo.zeff.control_point.ControlPointManagerSpecial2 method)

AddImageRegular() (duo.zeff.common.Common method) AddImageZeff() (duo.zeff.common.Common method) AddManuallyTunedExtraMaterial() (duo.zeff.control_point.ControlPointManager method) AddMaterial() (duo.core.mixture.Mixture method) AltTaylorCoeffCalculator (class in duo.zeff.taylor_coeff_calculator) ApplyModel() (duo.zeff.common.Common method) ApplyModelIteratively() (duo.zeff.common.Common method) ApplyModelRecursively() (duo.zeff.cai.Cai method) atomicMassUnit (duo.core.constant.Endfb attribute) Avogadro (duo.core.constant.Endfb attribute)

B

Blend (class in duo.zeff.blend) BlendWithAlpha() (duo.zeff.blend.Blend method) BlendWithConstantAlpha() (duo.zeff.blend.Blend method)

BlendWithoutAlpha() (duo.zeff.blend.Blend method) Bourque (class in duo.zeff.bourque) BourqueCoeffCalculator (class in duo.zeff.bourque_coeff_calculator) BSplineBourqueCoeffCalculator (class in duo.zeff.bourque_coeff_calculator)

C

Cai (class in duo.zeff.cai) CaiModifiedAbbemaCoeffCalculator (class in duo.zeff.abbema_coeff_calculator) Calculate() (duo.zeff.abbema.Abbema method) (duo.zeff.bourque.Bourque method) (duo.zeff.cai.Cai method) (duo.zeff.zeff_calculator.ZeffCalculator method) CalculateCSMacAtE() (duo.core.material.Material method) CalculateCSMicroXS() (duo.zeff.abbema_coeff_calculator.AbbemaCoeffCalculator method) CalculateCSMicroXSAtE() (duo.core.element.Element method) CalculateCTNumberForOneMaterial() (duo.zeff.zeff_table.ZeffTableGenerator method) CalculateCTNumbers() (duo.zeff.zeff_table.ZeffTableGenerator method) CalculateDualEnergyRatio() (duo.zeff.bourque.Bourque method) CalculateDualEnergyRatio2() (duo.zeff.bourque.Bourque method) CalculateElectronXS() (duo.zeff.bourque_coeff_calculator.BourqueCoeffCalculator method) (duo.zeff.bourque_coeff_calculator.BSplineBourqueCoeffCalculator method) (duo.zeff.bourque_coeff_calculator.ChebyshevBourqueCoeffCalculator method) (duo.zeff.torikoshi_coeff_calculator.TorikoshiCoeffCalculator method) CalculateElectronXSAtE() (duo.core.element.Element method) (duo.core.material.Material method) CalculateF() (duo.zeff.torikoshi_coeff_calculator.TorikoshiCoeffCalculator method) CalculateG() (duo.zeff.torikoshi_coeff_calculator.TorikoshiCoeffCalculator method) CalculateGivenCTNumber() (duo.zeff.abbema.Abbema method) (duo.zeff.bourque.Bourque method) (duo.zeff.cai.Cai method) (duo.zeff.common.Common method) CalculateGivenCTNumberGPU() (duo.zeff.abbema.Abbema method) CalculateGPU() (duo.zeff.abbema.Abbema method) CalculateMacAtE() (duo.core.material.Material method) CalculateMixtureDensity() (duo.core.mixture.Mixture method) CalculateNumElectronPerAtom() (duo.core.material.Material method) CalculatePEMacAtE() (duo.core.material.Material method) CalculatePEMicroXS() (duo.zeff.abbema_coeff_calculator.AbbemaCoeffCalculator method) CalculatePEMicroXSAtE() (duo.core.element.Element method)

CalculateRLMacAtE() (duo.core.material.Material method) CalculateRLMicroXS() (duo.zeff.abbema_coeff_calculator.AbbemaCoeffCalculator method) CalculateRLMicroXSAtE() (duo.core.element.Element method) CalculateSinglePixel() (duo.zeff.abbema.Abbema method) CalculateTotalMicroXS() (duo.zeff.abbema_coeff_calculator.AbbemaCoeffCalculator method) CalculateTotalMicroXSAtE() (duo.core.element.Element method) CalculateTotalMicroXSAtEPerAtom() (duo.core.material.Material method) CalculateXS() (duo.zeff.taylor_coeff_calculator.AltTaylorCoeffCalculator method) (duo.zeff.taylor_coeff_calculator.TaylorCoeffCalculator method) CalculateZ() (duo.zeff.abbema.Abbema method) CalculateZeff() (duo.zeff.power_law.PowerLaw method) CalculateZeff2() (duo.zeff.bourque.Bourque method) CalculateZeffAtE() (duo.core.material.Material method) (duo.zeff.bourque.Bourque method) (duo.zeff.taylor.Taylor method) (duo.zeff.torikoshi.Torikoshi method) CalculateZeffForControlPoint() (duo.zeff.control_point.ControlPointManager method) ChebyshevBourqueCoeffCalculator (class in duo.zeff.bourque_coeff_calculator) CheckLowOrHighKVP() (duo.core.dicom_decoder.dect_dicom_decoder method) ClampZeff() (duo.zeff.zeff_table.ZeffTableGenerator method) Commit() (duo.core.material.Material method) (duo.core.mixture.Mixture method) Common (class in duo.zeff.common) ControlPointContainer (class in duo.zeff.control_point) ControlPointManager (class in duo.zeff.control_point) ControlPointManagerColonEC (class in duo.zeff.control_point) ControlPointManagerColonECExtra (class in duo.zeff.control_point) ControlPointManagerKidneyStone (class in duo.zeff.control_point) ControlPointManagerKidneyStoneExtra (class in duo.zeff.control_point) ControlPointManagerSpecial1 (class in duo.zeff.control_point) ControlPointManagerSpecial2 (class in duo.zeff.control_point) ConvertCTNumberToMu() (duo.zeff.common.Common method) ConvertMuToCTNumber() (duo.zeff.common.Common method) CreateNewColormap() (duo.zeff.zeff_table.ZeffTableGenerator method)

D

dect_dicom_decoder (class in duo.core.dicom_decoder) DECTDicomPair (class in duo.core.dicom_decoder) Denoise() (duo.zeff.enhance.Enhance method) Derive1() (duo.zeff.abbema_coeff_calculator.ImprovedAbbemaCoeffCalculator method) (duo.zeff.abbema_coeff_calculator.ReproducedAbbemaCoeffCalculator method) Derive2() (duo.zeff.abbema_coeff_calculator.ImprovedAbbemaCoeffCalculator method) (duo.zeff.abbema_coeff_calculator.ReproducedAbbemaCoeffCalculator method) Derive3() (duo.zeff.abbema_coeff_calculator.ImprovedAbbemaCoeffCalculator method) (duo.zeff.abbema_coeff_calculator.ReproducedAbbemaCoeffCalculator method) DicomFile (class in duo.core.dicom_decoder) DisableDefaultKeyMap() (duo.core.image_viewer.ImageViewer method) duo module duo.core module duo.core.constant module duo.core.dicom_decoder module duo.core.duo_exception module duo.core.element module duo.core.element_table module duo.core.image_viewer module duo.core.material module duo.core.mixture module duo.core.photoatomic_xs module duo.core.search_interp module duo.core.surface_fitting module duo.core.timer module duo.nuclear_data module duo.nuclear_data.photoatomic module

duo.nuclear_data.photoatomic.photoatomic_xs_io module duo.spectrum module duo.spectrum.spectrum module duo.zeff module duo.zeff.abbema module duo.zeff.abbema_coeff_calculator module duo.zeff.blend module duo.zeff.bourque module duo.zeff.bourque_coeff_calculator module duo.zeff.cai module duo.zeff.common module duo.zeff.control_point module duo.zeff.enhance module duo.zeff.nist module duo.zeff.power_law module duo.zeff.taylor module duo.zeff.taylor_coeff_calculator module duo.zeff.torikoshi module duo.zeff.torikoshi_coeff_calculator module duo.zeff.zeff_calculator module duo.zeff.zeff_table module DuoException

E

ElectronicCleanse() (duo.zeff.common.Common method) Element (class in duo.core.element) ElementComponent (class in duo.core.material) ElementTable (class in duo.core.element_table)

Endfb (class in duo.core.constant) Enhance (class in duo.zeff.enhance) EvaluateSpline() (duo.zeff.bourque.Bourque method) (duo.zeff.bourque_coeff_calculator.BSplineBourqueCoeffCalculator method)

F

FindMixedFile() (duo.core.dicom_decoder.dect_dicom_decoder method) FindPairingFile() (duo.core.dicom_decoder.dect_dicom_decoder method) FindRoots() (duo.zeff.bourque_coeff_calculator.BourqueCoeffCalculator method) (duo.zeff.bourque_coeff_calculator.BSplineBourqueCoeffCalculator method) (duo.zeff.bourque_coeff_calculator.ChebyshevBourqueCoeffCalculator method) (duo.zeff.taylor_coeff_calculator.AltTaylorCoeffCalculator method) (duo.zeff.taylor_coeff_calculator.TaylorCoeffCalculator method) (duo.zeff.torikoshi_coeff_calculator.TorikoshiCoeffCalculator method)

Func() (in module duo.zeff.abbema) Func6() (in module duo.zeff.bourque) (in module duo.zeff.taylor_coeff_calculator) FuncCS() (in module duo.zeff.abbema_coeff_calculator) FuncDerivative() (in module duo.zeff.abbema) FuncPE() (in module duo.zeff.abbema_coeff_calculator) FuncRL() (in module duo.zeff.abbema_coeff_calculator)

G

GenerateZeffTable() (duo.zeff.zeff_table.ZeffTableGenerator method) GetAFromAWR() (duo.core.element.Element method) GetAllOtherXS() (duo.nuclear_data.photoatomic.photoatomic_xs_io.PhotoAtomicXSIOManager method) GetBasicInfo() (duo.nuclear_data.photoatomic.photoatomic_xs_io.PhotoAtomicXSIOManager method) GetCSList() (duo.core.element.Element method) GetElapsedTimeInSecond() (duo.core.timer.Timer method) (duo.core.timer.TimerManager method)

GetElementByZ() (duo.core.element_table.ElementTable method) GetImageCoordinateFromHU() (duo.zeff.zeff_table.ZeffTableGenerator method) GetMaterialFromNist() (duo.zeff.control_point.ControlPointManager method) GetRLList() (duo.core.element.Element method) GetTotalXS() (duo.nuclear_data.photoatomic.photoatomic_xs_io.PhotoAtomicXSIOManager method)

I

ImageViewer (class in duo.core.image_viewer) ImportNistMaterial() (duo.zeff.nist.Nist method) ImportSpectrum() (duo.spectrum.spectrum.SpectrumManager method) ImprovedAbbemaCoeffCalculator (class in duo.zeff.abbema_coeff_calculator) Initialize() (duo.core.element_table.ElementTable method) (duo.zeff.abbema_coeff_calculator.AbbemaCoeffCalculator method) (duo.zeff.abbema_coeff_calculator.CaiModifiedAbbemaCoeffCalculator method) (duo.zeff.abbema_coeff_calculator.ImprovedAbbemaCoeffCalculator method) (duo.zeff.abbema_coeff_calculator.OriginalAbbemaCoeffCalculator method) (duo.zeff.abbema_coeff_calculator.ReproducedAbbemaCoeffCalculator method) (duo.zeff.common.Common method) (duo.zeff.control_point.ControlPointManager method)

InitializeControlPointContainer() (duo.zeff.control_point.ControlPointManager method) InitializeHuLowHighImages() (duo.zeff.zeff_table.ZeffTableGenerator method) InitializeRBF() (duo.zeff.control_point.ControlPointManager method) InputAWRFromEndfb() (duo.nuclear_data.photoatomic.photoatomic_xs_io.PhotoAtomicXSIOManager method) InputData() (duo.nuclear_data.photoatomic.photoatomic_xs_io.PhotoAtomicXSIOManager method) InputXSFromGnd() (duo.nuclear_data.photoatomic.photoatomic_xs_io.PhotoAtomicXSIOManager method) InterpXSBinarySearch() (in module duo.core.search_interp) InterpXSLinearSearch() (in module duo.core.search_interp)

L

lightSpeed (duo.core.constant.Endfb attribute) LinLin() (in module duo.core.search_interp)

LoadAndPlotData() (duo.zeff.zeff_table.ZeffTableGenerator method) LoadDll() (duo.zeff.abbema.Abbema method) LogLog() (in module duo.core.search_interp)

M

Material (class in duo.core.material) MaterialComponent (class in duo.core.mixture) Mayneord (class in duo.zeff.power_law) Mixture (class in duo.core.mixture) module duo duo.core duo.core.constant duo.core.dicom_decoder duo.core.duo_exception duo.core.element duo.core.element_table duo.core.image_viewer duo.core.material duo.core.mixture duo.core.photoatomic_xs duo.core.search_interp duo.core.surface_fitting duo.core.timer duo.nuclear_data duo.nuclear_data.photoatomic duo.nuclear_data.photoatomic.photoatomic_xs_io duo.spectrum duo.spectrum.spectrum duo.zeff duo.zeff.abbema duo.zeff.abbema_coeff_calculator duo.zeff.blend duo.zeff.bourque duo.zeff.bourque_coeff_calculator duo.zeff.cai duo.zeff.common duo.zeff.control_point duo.zeff.enhance duo.zeff.nist duo.zeff.power_law duo.zeff.taylor duo.zeff.taylor_coeff_calculator duo.zeff.torikoshi duo.zeff.torikoshi_coeff_calculator duo.zeff.zeff_calculator duo.zeff.zeff_table

N

neutronMass (duo.core.constant.Endfb attribute)

Nist (class in duo.zeff.nist)

O

OnClick() (duo.core.image_viewer.ImageViewer method) OnKeyPress() (duo.core.image_viewer.ImageViewer method)

OriginalAbbemaCoeffCalculator (class in duo.zeff.abbema_coeff_calculator) OutputAWRToFile() (duo.nuclear_data.photoatomic.photoatomic_xs_io.PhotoAtomicXSIOManager method)

P

ParameterizeAtE() (duo.zeff.bourque_coeff_calculator.BourqueCoeffCalculator method) (duo.zeff.bourque_coeff_calculator.BSplineBourqueCoeffCalculator method) (duo.zeff.bourque_coeff_calculator.ChebyshevBourqueCoeffCalculator method) (duo.zeff.taylor_coeff_calculator.AltTaylorCoeffCalculator method) (duo.zeff.taylor_coeff_calculator.TaylorCoeffCalculator method) (duo.zeff.torikoshi_coeff_calculator.TorikoshiCoeffCalculator method) ParameterizeDualEnergyRatioAndZ() (duo.zeff.bourque.Bourque method) PhotoAtomicXS (class in duo.core.photoatomic_xs) PhotoAtomicXSIOManager (class in duo.nuclear_data.photoatomic.photoatomic_xs_io) Plot() (duo.core.image_viewer.ImageViewer method) PlotDiff() (duo.zeff.zeff_table.ZeffTableGenerator method)

PlotDiscretePoint() (duo.zeff.control_point.ControlPointManager method) PlotFullSurface() (duo.zeff.control_point.ControlPointManager method) PlotSingleImage() (duo.zeff.common.Common method) PlotZeff() (duo.zeff.zeff_table.ZeffTableGenerator method) PolyFit2D() (in module duo.core.surface_fitting) PolyVal2D() (in module duo.core.surface_fitting) PowerLaw (class in duo.zeff.power_law) ProcessCTImage() (duo.zeff.common.Common method) ProcessDirectory() (duo.core.dicom_decoder.dect_dicom_decoder method) ProcessDirectoryWithLowHighAndMixedImages() (duo.core.dicom_decoder.dect_dicom_decoder method) ProcessDirectoryWithMixedImage() (duo.core.dicom_decoder.dect_dicom_decoder method)

R

RemoveVerticalPartialVolumeEffect() (duo.zeff.enhance.Enhance method)

ReproducedAbbemaCoeffCalculator (class in duo.zeff.abbema_coeff_calculator)

S

SaveDataToDisk() (duo.zeff.zeff_table.ZeffTableGenerator method) SaveDicom() (duo.zeff.common.Common method) SearchMaterialFromNist() (duo.zeff.nist.Nist method) Show() (duo.core.element.Element method) (duo.core.material.Material method) (duo.core.timer.TimerManager method) (duo.nuclear_data.photoatomic.photoatomic_xs_io.PhotoAtomicXSIOManager method) (duo.zeff.abbema_coeff_calculator.AbbemaCoeffCalculator method) (duo.zeff.nist.Nist method)

ShowImageInfo() (duo.zeff.common.Common method) ShowInfo() (duo.core.material.Material method) SpectrumManager (class in duo.spectrum.spectrum) StartOrResume() (duo.core.timer.Timer method) (duo.core.timer.TimerManager method) Stop() (duo.core.timer.Timer method) (duo.core.timer.TimerManager method)

T

Taylor (class in duo.zeff.taylor) TaylorCoeffCalculator (class in duo.zeff.taylor_coeff_calculator) Timer (class in duo.core.timer)

TimerManager (class in duo.core.timer) Torikoshi (class in duo.zeff.torikoshi) TorikoshiCoeffCalculator (class in duo.zeff.torikoshi_coeff_calculator)

U

UpdateInfo() (duo.core.image_viewer.ImageViewer method)

V

VerifyModel() (duo.zeff.common.Common method)

W

WriteControlPointToFile() (duo.zeff.control_point.ControlPointManager method)

Z

ZeffCalculator (class in duo.zeff.zeff_calculator)

ZeffTableGenerator (class in duo.zeff.zeff_table)